Stem-loop fve-MIR11289

Accession

MI0036432

Description

Fragaria vesca fve-MIR11289 precursor miRNA

Sequence

ugaaUGCUUCAAGUCUGGCCAAUACUugcucgcucaaaucaucuuucuugccucuuaggguuugaucauccauuugugaaccaguacaguccggcaaagaucggccauucgccugaggccacaa
.....((((((.((.(((((.((..(((((.((((((((......((..((((....))))..))......)))))...........)))..)))))..)).)))))...)).)))))).....

Structure

ugaaU      A  --C     A  AC     -c   -----------     caucuu  uu    c 
     GCUUCA GU   UGGCC AU  Uugcu  gcu           caaau      uc  gccu u
     |||||| ||   ||||| ||  |||||  |||           |||||      ||  ||||  
     cggagu cg   accgg ua  aacgg  uga           guuua      ag  uggg u
aacac      c  cuu     c  ga     cc   caugaccaagu     ccuacu  uu    a 

Annotation confidence Not enough data

Genome context

LG1: 6290557-6290680 [-]

Mature fve-miR11289

• Accession: MIMAT0044571
• Description: Fragaria vesca fve-miR11289 mature miRNA
• Sequence: 5 - UGCUUCAAGUCUGGCCAAUACU - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610