Stem-loop fve-MIR11291

Accession

MI0036435

Description

Fragaria vesca fve-MIR11291 precursor miRNA

Sequence

ggaaaacccuaauucgacuggaaaaagaaagaccgcaaagaagcccaggacuuucgccgccccuuucuucacagaaaggcuggcucuuggcgcccgggaaauccuUUGCGGUCUUGUCUCUUCCAAUucgaauucggguuuuuu
.((((((((.(((((((.(((((..(((((((((((((((...(((.((.....((((((((((((((....)))))))..)))....)))))).))).....)))))))))))).))).)))))..))))))).)))))))).

Structure

g        u       -c     aa   -            --aag   a  acuuu    ----   --       u 
 gaaaaccc aauucga  uggaa  aga aagaccgcaaag     ccc gg     cgcc    gcc  ccuuucu c
 |||||||| |||||||  |||||  ||| ||||||||||||     ||| ||     ||||    |||  |||||||  
 uuuuuggg uuaagcu  ACCUU  UCU UUCUGGCGUUuc     ggg cc     gcgg    cgg  ggaaaga a
u        c       UA     -C   G            cuaaa   c  -----    uucu   uc       c 

Annotation confidence Not enough data

Genome context

LG7: 15528972-15529115 [-]

Mature fve-miR11291

• Accession: MIMAT0044574
• Description: Fragaria vesca fve-miR11291 mature miRNA
• Sequence: 106 - UUGCGGUCUUGUCUCUUCCAAU - 127
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610