Stem-loop fve-MIR11294

Accession

MI0036438

Description

Fragaria vesca fve-MIR11294 precursor miRNA

Sequence

guacguuauaugucaacagucccgUUCACCUGGACCAUAACUGACCaaaugaauccuaggguggagauauaaucagcaauagggcuguguuuugggauuucuuaaugcauuuuggaccuuggcuugaucugacgguuacugaccaaauuucauuuggucaguuauggucaggugaacgggacuguauaugucaaacaguugauguau
((((((((..((((((((((((((((((((((.(((((((((((((((((((((((......)))......((((((..(((((((((((.(((((....))))).))))...)).))))))).)))).....((((...))))....)))))))))))))))))))))))))))))))))))))...))....)))..))))))))

Structure

        ua   ----  ---                 G                    --uccuaggguggagauaua    -  aa     -  ---    u     a 
guacguua  ugu    ca   acagucccgUUCACCUG ACCAUAACUGACCaaaugaa                    auca gc  uaggg cu   gugu uuggg u
||||||||  |||    ||   ||||||||||||||||| ||||||||||||||||||||                    |||| ||  ||||| ||   |||| |||||  
uauguagu  aca    gu   ugucagggcaaguggac ugguauugacugguuuacuu                    uagu cg  guucc gg   uacg aauuc u
        ug   aacu  aua                 -                    uaaaccagucauuggcaguc    u  --     a  uuu    u     u 

Annotation confidence Not enough data

Genome context

LG6: 25709178-25709384 [-]

Mature fve-miR11294

• Accession: MIMAT0044577
• Description: Fragaria vesca fve-miR11294 mature miRNA
• Sequence: 25 - UUCACCUGGACCAUAACUGACC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610