miRBase entry: fve-MIR11297

Stem-loop fve-MIR11297


Accession
MI0036441
Description
Fragaria vesca fve-MIR11297 precursor miRNA


Sequence

caaguccgccgaauugcaguuuuccggcgagaucgaucuugucugaaguuuuagguggagguuguugcucgacgagaucgauuugaaggucuaggcagcaaucuccacccaaaacuuCAGACAAGAUCGAUCUCGCCUgaaaacugcaauuuggcggacuug
((((((((((((((((((((((((.(((((((((((((((((((((((((((.((((((((((((((((.....(((((........))))).)))))))))))))))).))))))))))))))))))))))))))).))))))))))))))))))))))))

Structure
                        c                           a                cgacg     gau 
caaguccgccgaauugcaguuuuc ggcgagaucgaucuugucugaaguuuu gguggagguuguugcu     agauc   u
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||     |||||    
guucaggcgguuuaacgucaaaag CCGCUCUAGCUAGAACAGACuucaaaa ccaccucuaacgacgg     ucugg   u
                        U                           c                ----a     aag 


Annotation confidence Not enough data
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Genome context
LG4: 9651985-9652146 [+]

Database links

Mature fve-miR11297

Accession MIMAT0044580
Description Fragaria vesca fve-miR11297 mature miRNA
Sequence 118 - CAGACAAGAUCGAUCUCGCCU - 138
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610