miRBase entry: fve-MIR11298

Stem-loop fve-MIR11298


Accession
MI0036442
Description
Fragaria vesca fve-MIR11298 precursor miRNA


Sequence

caucucugcaaaauuucagccaauuuggugaucguuaaguuccucaaacucgaguuuuucugguaugaacacaaccagacagaauucaauccguccauuuguuuuucgaguUUGAGGGGCUUAACGAUUACCaaauuaggugaaauuuuucagagaug
((((((((.(((((((((.(.(((((((((((((((((((((((((((((((((((((((((((.((....)))))))).)))))....................)))))))))))))))))))))))))))))))).).))))))))).))))))))

Structure
        c         g c                                --------------------     -      a  a 
caucucug aaaauuuca c aauuuggugaucguuaaguuccucaaacucga                    guuuu ucuggu ug a
|||||||| ||||||||| | ||||||||||||||||||||||||||||||||                    ||||| |||||| ||  
guagagac uuuuaaagu g uuaaaCCAUUAGCAAUUCGGGGAGUUugagcu                    uaaga agacca ac c
        u         g a                                uuuuguuuaccugccuaacu     c      -  a 


Annotation confidence Not enough data
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Genome context
LG6: 15969655-15969812 [-]

Database links

Mature fve-miR11298

Accession MIMAT0044581
Description Fragaria vesca fve-miR11298 mature miRNA
Sequence 112 - UUGAGGGGCUUAACGAUUACC - 132
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610