Stem-loop fve-MIR11299

Accession

MI0036443

Description

Fragaria vesca fve-MIR11299 precursor miRNA

Sequence

aauaugcauuuuauuaucuacccCAAAUAGGGUUGGCUGAUACUaguaauuccuuuucuuuuagaacuuggaguugcuaugaucguaacauuauucuucccagccuaaacgaagagaaaguacuaguauuagucaaacccuaauugggguuugauaugaucaugauauu
(((((.(((..(..((((.(((((((.(((((((((((((((((((((.((.((((((.(((((..((.((((((((.......)))))........))).)).))))).)))))).)).)))))))))))))).))))))).)))))))..))))..)..))))))))

Structure

     g   uu au    -u       A       -              a  c      u     aa  u   --------     ua 
aauau cau  u  uauc  acccCAA UAGGGUU GGCUGAUACUagua uu cuuuuc uuuag  cu gga        guugc  u
||||| |||  |  ||||  ||||||| ||||||| |||||||||||||| || |||||| |||||  || |||        |||||  g
uuaua gua  a  auag  ugggguu aucccaa cugauuaugaucau aa gagaag aaauc  ga ccu        caaug  a
     -   cu gu    uu       a       a              g  a      c     -c  c   ucuuauua     cu 

Annotation confidence Not enough data

Genome context

LG6: 2213239-2213407 [-]

Mature fve-miR11299

• Accession: MIMAT0044582
• Description: Fragaria vesca fve-miR11299 mature miRNA
• Sequence: 24 - CAAAUAGGGUUGGCUGAUACU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610