Stem-loop fve-MIR11301

Accession

MI0036445

Description

Fragaria vesca fve-MIR11301 precursor miRNA

Sequence

ggcuccaugguugaucuUCAGAGUUGUAAUAUAUUGAUaaaugcauguugcaaggguggagaggucgauaaggccaacacgauuuucaguauauuacccuuugcuuuuaucaauaugcuacaacuaugaacauccacuauggaacu
...((((((((.(((.((((.(((((((.((((((((((((.(((......(((((((....((((.....))))...((........))....)))))))))).)))))))))))).))))))).)))).))).))))))))...

Structure

ggc        u   c    G       A            u   uguugc       ---------------gaga    g 
   uccauggu gau uUCA AGUUGUA UAUAUUGAUaaa gca      aagggug                   gguc a
   |||||||| ||| |||| ||||||| |||||||||||| |||      |||||||                   |||| u
   agguauca cua aagu ucaacau guauaacuauuu cgu      uucccau                   ccgg a
uca        c   c    a       c            u   ------       uauaugacuuuuagcacaa    a 

Annotation confidence Not enough data

Genome context

LG2: 1429952-1430097 [+]

Mature fve-miR11301

• Accession: MIMAT0044584
• Description: Fragaria vesca fve-miR11301 mature miRNA
• Sequence: 18 - UCAGAGUUGUAAUAUAUUGAU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610