Stem-loop fve-MIR11312

Accession

MI0036456

Description

Fragaria vesca fve-MIR11312 precursor miRNA

Sequence

caaggcauuuucguuaacucucccucaagggcuucuagcaaugccggaacacacauaaggcaagcuUGGAGCUGUUGGGGAGAGUUAacaaaaagugucuug
(((((((((((.((((((((((((.(((.((((((.(((..((((.............)))).))).)))))).)))))))))))))))..)))))))))))

Structure

           -c            u   g      u   aa    ggaac 
caaggcauuuu  guuaacucuccc caa ggcuuc agc  ugcc     a
|||||||||||  |||||||||||| ||| |||||| |||  ||||     c
guucugugaaa  caAUUGAGAGGG GUU UCGAGG ucg  acgg     a
           aa            -   G      U   -a    aauac 

Annotation confidence Not enough data

Genome context

LG5: 2677133-2677234 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fve-MIR11312

Mature fve-miR11312

• Accession: MIMAT0044595
• Description: Fragaria vesca fve-miR11312 mature miRNA
• Sequence: 67 - UGGAGCUGUUGGGGAGAGUUA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610