Stem-loop fve-MIR477b

Accession

MI0036457

Description

Fragaria vesca fve-MIR477b precursor miRNA

Sequence

uauucagcgcacccgugugcgcCGCGCACCCGUUCAUCUUCGCcguccauuugaugcagacuuuugacuuuuucaaaaugaauggcagagauggacgggggcgcggcgcacccgggugcacuguaua
....(((.(((((((.(((((((((((.((((((((((((.(((((.(((((((...((.(....).))...)).))))).))))).)))))))))))).))))))))))).))))))).)))....

Structure

uauu   c       u           A            C     c     -  ugc  a u 
    cag gcacccg gugcgcCGCGC CCCGUUCAUCUU GCcgu cauuu ga   ag c u
    ||| ||||||| ||||||||||| |||||||||||| ||||| ||||| ||   || |  
    guc cgugggc cacgcggcgcg gggcagguagag cggua guaaa cu   uc g u
auau   a       c           g            a     a     a  uuu  a u 

Annotation confidence Not enough data

Genome context

LG6: 12294818-12294944 [-]

Mature fve-miR477b

• Accession: MIMAT0044596
• Description: Fragaria vesca fve-miR477b mature miRNA
• Sequence: 23 - CGCGCACCCGUUCAUCUUCGC - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610