Stem-loop ppt-MIR11319

Accession

MI0036467

Description

Physcomitrella patens ppt-MIR11319 precursor miRNA

Sequence

guuugaagcugCUACGGGGUCGUUUUGCUCGUaagggcgugagugggaauuggugaccuccaguuagggcaagauaaggguuuccagcagaucgaccucguagcagcuguaaac
(((((.((((((((((((((((.((((((......(.(.(((.((((...........)))).))).).).......((....)))))))).)))))))))))))))).)))))

Structure

     a                U      ---------CGUaag g g   g    aauu 
guuug agcugCUACGGGGUCG UUUGCU               g c uga uggg    g
||||| |||||||||||||||| ||||||               | | ||| ||||    g
caaau ucgacgaugcuccagc agacga               c g auu accu    u
     g                u      ccuuugggaauagaa g g   g    ccag 

Annotation confidence Not enough data

Genome context

Chr03: 21675183-21675296 [+]

Mature ppt-miR11319

• Accession: MIMAT0044606
• Description: Physcomitrella patens ppt-miR11319 mature miRNA
• Sequence: 12 - CUACGGGGUCGUUUUGCUCGU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26209555
   Comprehensive Annotation of Physcomitrella patens Small RNA Loci Reveals That the Heterochromatic Short Interfering RNA Pathway Is Largely Conserved in Land Plants
   "Coruh C, Cho SH, Shahid S, Liu Q, Wierzbicki A, Axtell MJ"
   "Plant Cell (2015) 27:2148-2162