Stem-loop cst-MIR11335

Accession

MI0036486

Description

Cucumis sativus cst-MIR11335 precursor miRNA

Sequence

aggccgugaauucuacagcuuuagccgucguucgaguaauaaaacggguggugauacaGUUGGGAGGAUGGAGCGGUUu
.((((((..(((((.(((((...(((.(((((..(....)..)))))..))).....)))))..)))))...)))))).

Structure

a      -ga     -a     --uua   -g     cg g 
 ggccgu   auucu  cagcu     gcc  ucguu  a u
 ||||||   |||||  |||||     |||  |||||  |  
 UUGGCG   UAGGA  GUUGa     ugg  ggcaa  u a
u      AGG     GG     cauag   ug     aa a 

Annotation confidence Not enough data

Genome context

CM002924.1: 18772568-18772646 [+]

Mature cst-miR11335

• Accession: MIMAT0044625
• Description: Cucumis sativus cst-miR11335 mature miRNA
• Sequence: 59 - GUUGGGAGGAUGGAGCGGUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26076360
   High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L.) microRNAs in Response to Cucumber Green Mottle Mosaic Virus Infection
   Liu HW, Luo LX, Liang CQ, Jiang N, Liu PF, Li JQ
   PLoS One (2015) 10:e0129002