miRBase entry: pab-MIR156h

Stem-loop pab-MIR156h


Accession
MI0036568
Description
Picea abies pab-MIR156h precursor miRNA

Literature search
2 open access papers mention pab-MIR156h
(7 sentences)

Sequence

aggaagaccuuguuggauaaggugcUGACAGAAGAGAGUGGGCACacauaacuccuaacauuguuuguguguggagagaugcgugccuaccgucucuuucugucagcucucaacggaggcacuauccu
((((((.((((((((....(((.((((((((((((((((((((((.(((..((((..((((.....))))..))))..))).))))))))..)))).))))))))))))))))).))))..)).))))

Structure
    -  -a    -    gaua   u          -    --        a   aa    ua    u 
agga ag  ccuu guug    agg gcUGACAGAA GAGA  GUGGGCAC cau  cucc  acau g
|||| ||  |||| ||||    ||| |||||||||| ||||  |||||||| |||  ||||  |||| u
uccu uc  ggag caac    ucu cgacugucuu cucu  cauccgug gua  gagg  ugug u
    a  ac    g    ----   -          u    gc        c   ga    ug    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_352257: 4899-5026 [+]

Database links

Mature pab-miR156h

Accession MIMAT0044666
Description Picea abies pab-miR156h mature miRNA
Sequence 26 - UGACAGAAGAGAGUGGGCAC - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918