miRBase entry: pab-MIR156x

Stem-loop pab-MIR156x


Accession
MI0036583
Description
Picea abies pab-MIR156x precursor miRNA

Literature search
2 open access papers mention pab-MIR156x
(7 sentences)

Sequence

gaagguguuggugUGACAGGAGAUAGAGAGCACauacguucacaugcagagagucugcuuuugagauguaugugcucucuaugcuucugucgucacauuacaccuuc
((((((((..((((((((((((((((((((((((((((((((...(((((...)))))...))).))))))))))))))))).))))))))).)))...))))))))

Structure
        -ug   -         -                 -   cau     g 
gaaggugu   gug UGACAGGAG AUAGAGAGCACauacgu uca   gcaga  
||||||||   ||| ||||||||| ||||||||||||||||| |||   ||||| a
cuuccaca   cac gcugucuuc uaucucucguguaugua agu   cgucu  
        uua   u         g                 g   uuu     g 


Annotation confidence Not enough data
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Genome context
MA_125740: 7245-7351 [-]

Database links

Mature pab-miR156x

Accession MIMAT0044681
Description Picea abies pab-miR156x mature miRNA
Sequence 14 - UGACAGGAGAUAGAGAGCAC - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918