miRBase entry: pab-MIR160e

Stem-loop pab-MIR160e


Accession
MI0036594
Description
Picea abies pab-MIR160e precursor miRNA

Literature search
1 open access papers mention pab-MIR160e
(1 sentences)

Sequence

ucaaaCUGCCUGGCUCCCUGUAUGCCaucuguguagcuuaucuggacauugauaugcgcauaguuggcauacagggauccaugcagaaguc
.....((((.(((.(((((((((((((.((((((.((.((((........)))).)))))))).))))))))))))).))).)))).....

Structure
ucaaa    C   C             u      a  u    ugg 
     CUGC UGG UCCCUGUAUGCCa cugugu gc uauc   a
     |||| ||| ||||||||||||| |||||| || ||||    
     gacg acc agggacauacggu gauacg cg auag   c
cugaa    u   u             u      -  u    uua 


Annotation confidence Not enough data
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Genome context
MA_744037: 5846-5936 [-]

Database links

Mature pab-miR160e

Accession MIMAT0044692
Description Picea abies pab-miR160e mature miRNA
Sequence 6 - CUGCCUGGCUCCCUGUAUGCC - 26
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918