miRBase entry: pab-MIR164b

Stem-loop pab-MIR164b


Accession
MI0036600
Description
Picea abies pab-MIR164b precursor miRNA


Sequence

auagggagggcuauacaugcuggagaagcagggcacgugcgaggcagucugugaugggcuacugccgaugCAUGUGCUCUUUUUCUCCAUCauggaauacccaccuau
(((((..(((.(((.((((.((((((((.((((((((((((.((((((..((.....)).))))))..)))))))))))).)))))))).))))..)))))).)))))

Structure
     ga   c   -a    c        c            -a      cu  g 
auagg  ggg uau  caug uggagaag agggcacgugcg  ggcagu  gu a
|||||  ||| |||  |||| |||||||| ||||||||||||  ||||||  || u
uaucc  ccc aua  guaC ACCUCUUU UCUCGUGUACgu  ccguca  cg g
     -a   -   ag    U        U            ag      -u  g 


Annotation confidence Not enough data
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Genome context
MA_61906: 2587-2694 [-]

Database links

Mature pab-miR164b

Accession MIMAT0044698
Description Picea abies pab-miR164b mature miRNA
Sequence 71 - CAUGUGCUCUUUUUCUCCAUC - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918