Stem-loop pab-MIR169b

Accession

MI0036614

Description

Picea abies pab-MIR169b precursor miRNA

Sequence

cccagcgggccaagaucgugaugcUCAGCCAAGAAUGACUUGCCCucaugacggacgugaccuccuuauaauuaauagaaugauaagugacugaaaggugaucaauuugguuugugggcaagucauuuuggcgaagcaacgcgcuguccuuuucgcguugcaggg
(((((((.(..(((((((((.((((..(((((((.((((((((((.((...((((.((.((((((((((.(((.....))).))))).))......))).))...))))...)).)))))))))))))))))..)))).))))..)).)))..).)))))..)).

Structure

-  --     g cc   -  --    a    CA       A          u  uga    --c  g   ------  -     a   a 
 cc  cagcg g  aag au  cgug ugcU  GCCAAGA UGACUUGCCC ca   cgga   gu acc      uc cuuau auu a
 ||  ||||| |  ||| ||  |||| ||||  ||||||| |||||||||| ||   ||||   || |||      || ||||| ||| u
 gg  guugc c  uuc ug  gcgc acga  cgguuuu acugaacggg gu   guuu   ua ugg      ag gaaua uaa a
g  ac     g uu   c  uc    a    ag       -          u  uug    aac  g   aaaguc  u     g   g 

Annotation confidence Not enough data

Genome context

MA_696729: 3147-3311 [+]

Mature pab-miR169b

• Accession: MIMAT0044712
• Description: Picea abies pab-miR169b mature miRNA
• Sequence: 25 - UCAGCCAAGAAUGACUUGCCC - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918