Stem-loop pab-MIR171e

Accession

MI0036622

Description

Picea abies pab-MIR171e precursor miRNA

Literature search

1 open access papers mention pab-MIR171e
(1 sentences)

Sequence

ggugcaaaggcgauauugacgugccucaauuugaagacauuguuagaggaauucuagcucugugcucugaUUGAGCCGCGUCAAUAUCCCCuucucuuuuucuuuugccuuugccu
((.((((((((((((((((((((.(((((((.((..(((..((((((.....))))))..)))..)).))))))).))))))))))))..................))))))))))

Structure

  u        ------------------            c       u  ag   uu      g 
gg gcaaaggc                  gauauugacgug cucaauu ga  aca  guuaga g
|| ||||||||                  |||||||||||| ||||||| ||  |||  |||||| a
uc cguuuccg                  CUAUAACUGCGC GAGUUag cu  ugu  cgaucu a
  -        uuuucuuuuucucuuCCC            C       u  cg   cu      u 

Annotation confidence Not enough data

Genome context

MA_179192: 414-529 [+]

Mature pab-miR171e

• Accession: MIMAT0044720
• Description: Picea abies pab-miR171e mature miRNA
• Sequence: 71 - UUGAGCCGCGUCAAUAUCCCC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918