miRBase entry: pab-MIR319c

Stem-loop pab-MIR319c


Accession
MI0036625
Description
Picea abies pab-MIR319c precursor miRNA

Literature search
1 open access papers mention pab-MIR319c
(3 sentences)

Sequence

aagcccagaugggagcuuccuuaaguccaaaggacguccaaauuuuuuacagggauagcucgaauccuUUGGACUGAAGGGAGCUCCCaucuggguuu
((((((((((((((((((((((.((((((((((((((((.............))).....))..))))))))))).))))))))))))))))))))))

Structure
                      a           --  -----   aaauu 
aagcccagaugggagcuuccuu aguccaaagga  cg     ucc     u
|||||||||||||||||||||| |||||||||||  ||     |||     u
uuugggucuaCCCUCGAGGGAA UCAGGUUuccu  gc     agg     u
                      G           aa  ucgau   gacau 


Annotation confidence Not enough data
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Genome context
MA_104055: 24902-24999 [+]

Database links

Mature pab-miR319c

Accession MIMAT0044723
Description Picea abies pab-miR319c mature miRNA
Sequence 69 - UUGGACUGAAGGGAGCUCCC - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918