Stem-loop pab-MIR319e

Accession

MI0036627

Description

Picea abies pab-MIR319e precursor miRNA

Literature search

1 open access papers mention pab-MIR319e
(3 sentences)

Sequence

gagaguucucuuucaguccacuaaaggaagguugccuguuggaaacagccaccuauuuauucauucaccaacucaaucuuuuacacacagacggcacgacuggguugauuugugaaugaugugggagcugauuucguccuguaaacgucuuuucUUGAACUGAAGGGAGCUCCC
..((((((.((((((((.((..((((((...((((....(((((.((((..((...((((((((....(((((((.((...................)).)))))))....))))))))...))..)))).)))))....))))...))))))..)).))))))))))))))..

Structure

ga      u        c  cu      agg    cugu     a    ca  uau        ucac       a  uuuuacac 
  gaguuc cuuucagu ca  aaagga   uugc    uggaa cagc  cc   uuauucau    caacuca uc        a
  |||||| |||||||| ||  ||||||   ||||    ||||| ||||  ||   ||||||||    ||||||| ||        c
  CUCGAG GGAAGUCA GU  uuuucu   aaug    gcuuu gucg  gg   aguaagug    guugggu ag        a
CC      -        A  Uc      gca    uccu     a    ag  ugu        uuua       c  cacggcag 

Annotation confidence Not enough data

Genome context

MA_501749: 1649-1822 [-]

Mature pab-miR319e

• Accession: MIMAT0044725
• Description: Picea abies pab-miR319e mature miRNA
• Sequence: 155 - UUGAACUGAAGGGAGCUCCC - 174
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918