Stem-loop pab-MIR390b

Accession

MI0036633

Description

Picea abies pab-MIR390b precursor miRNA

Literature search

1 open access papers mention pab-MIR390b
(2 sentences)

Sequence

ggcaugauggaauuauaAAGCUCAGGAGGGAUAGCGCCcgcugcaagacacgcccguaucucaaguggcgcuauccauccugggcuucauaauuucuuuauacc
((.((((.((((((((.((((((((((.((((((((((.(((...(((.((....)).)))..))))))))))))).)))))))))).)))))))).)))).))

Structure

  c    u        a          G          c   gca   c  g 
gg auga ggaauuau AAGCUCAGGA GGAUAGCGCC gcu   aga ac c
|| |||| |||||||| |||||||||| |||||||||| |||   ||| ||  
cc uauu cuuuaaua uucggguccu ccuaucgcgg uga   ucu ug c
  a    u        c          a          -   -ac   a  c 

Annotation confidence Not enough data

Genome context

MA_3202: 11305-11408 [+]

Mature pab-miR390b

• Accession: MIMAT0044731
• Description: Picea abies pab-miR390b mature miRNA
• Sequence: 18 - AAGCUCAGGAGGGAUAGCGCC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918