miRBase entry: pab-MIR397s

Stem-loop pab-MIR397s


Accession
MI0036685
Description
Picea abies pab-MIR397s precursor miRNA

Literature search
1 open access papers mention pab-MIR397s
(2 sentences)

Sequence

ugcUCAUCAUUGAGAGCAGCAUUGaccguuugaacugaccaacaguucgaccggucgaugcugcauucaaugauaaucu
.....(((((((((.(((((((((((((.((((((((.....)))))))).))))))))))))).))))))))).....

Structure
ugcUC         A             u        a 
     AUCAUUGAG GCAGCAUUGaccg uugaacug c
     ||||||||| ||||||||||||| |||||||| c
     uaguaacuu cgucguagcuggc agcuugac a
ucuaa         a             c        a 


Annotation confidence Not enough data
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Genome context
MA_10142494: 326-404 [+]

Database links

Mature pab-miR397s

Accession MIMAT0044783
Description Picea abies pab-miR397s mature miRNA
Sequence 4 - UCAUCAUUGAGAGCAGCAUUG - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918