Stem-loop pab-MIR398b

Accession

MI0036689

Description

Picea abies pab-MIR398b precursor miRNA

Sequence

agacagagcaggcucgacuggggucaccuuggaacacauucacauucauauucacaggacugaugaugcgaucuagagauuagauucauguggaCGUGUUCCCAGGUCGCCCCUGucgaaaccuccucugcu
((.(((((.(((.(((((.(((((.((((.(((((((.(((((((.(((..(((......)))..))).((((((.....)))))).))))))).))))))).)))).))))).)))))..))).)))))))

Structure

  a     c   -c     u     c    u       a       ------------------u   au   ca 
ag cagag agg  ucgac ggggu accu ggaacac uucacau                   cau  uca  g
|| ||||| |||  ||||| ||||| |||| ||||||| |||||||                   |||  |||   
uc gucuc ucc  agcuG CCCCG UGGA CCUUGUG aggugua                   gua  agu  g
  -     c   aa     U     C    C       C       cuuagauuagagaucuagc   gu   ca 

Annotation confidence Not enough data

Genome context

MA_199245: 4941-5072 [+]

Mature pab-miR398b

• Accession: MIMAT0044787
• Description: Picea abies pab-miR398b mature miRNA
• Sequence: 95 - CGUGUUCCCAGGUCGCCCCUG - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918