miRBase entry: pab-MIR2111

Stem-loop pab-MIR2111


Accession
MI0036710
Description
Picea abies pab-MIR2111 precursor miRNA


Sequence

ggacaaugagcagaUAAUCUGCAUCCUGGGGUUUGagacucggaacaaaucgugucaugccuaacaaacccuagaaugcagauuauccucucgucguuc
((((.(((((..((((((((((((.((((((((((.(((.((........)).)))........)))))))))).))))))))))))..))))).))))

Structure
    a     ca            C          -------a   u  gaa 
ggac augag  gaUAAUCUGCAU CUGGGGUUUG        gac cg   c
|||| |||||  |||||||||||| ||||||||||        ||| ||    
cuug ugcuc  cuauuagacgua gaucccaaac        cug gc   a
    c     uc            a          aauccgua   u  uaa 


Annotation confidence Not enough data
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Genome context
MA_466244: 5727-5825 [+]

Database links

Mature pab-miR2111

Accession MIMAT0044808
Description Picea abies pab-miR2111 mature miRNA
Sequence 15 - UAAUCUGCAUCCUGGGGUUUG - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918