miRBase entry: pab-MIR2950b

Stem-loop pab-MIR2950b


Accession
MI0036712
Description
Picea abies pab-MIR2950b precursor miRNA


Sequence

agggauggccaaggugUUCCAUCUCUUGCACACUGAGccauauuucucacuacaacuggaaaugacuuggugugcaagguauggcauaucuugccuaucucu
((((((((.((((((((.((((.((((((((((((((...((((((.((.......)))))))).)))))))))))))).)))).)))))))).))))))))

Structure
        c        U    C              cca      u  cu 
agggaugg caaggugU CCAU UCUUGCACACUGAG   uauuuc ca  a
|||||||| |||||||| |||| ||||||||||||||   |||||| ||  c
ucucuauc guucuaua ggua ggaacgugugguuc   guaaag gu  a
        c        c    u              --a      -  ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_13599: 20011-20112 [-]

Database links

Mature pab-miR2950b

Accession MIMAT0044810
Description Picea abies pab-miR2950b mature miRNA
Sequence 17 - UUCCAUCUCUUGCACACUGAG - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918