miRBase entry: pab-MIR3695c

Stem-loop pab-MIR3695c


Accession
MI0036717
Description
Picea abies pab-MIR3695c precursor miRNA


Sequence

cgugccuuucuuucagcccucacUGUCGCCUGGUCGUUGUGGGGgguugaugaucauuacuagaaaagugaaguuuucuaguaauggucaucaagcucuuacaacggccaggcgacauugcggacuuaaacaacggcacg
((((((.((.(((.((.((.((.((((((((((((((((((((((.(((((((((((((((((((((......))))))))))))))))))))).)))))))))))))))))))))).)).)).)).))).)).))))))

Structure
      u  c   c  c  u  c                      g                     gu 
cgugcc uu uuu ag cc ca UGUCGCCUGGUCGUUGUGGGGg uugaugaucauuacuagaaaa  g
|||||| || ||| || || || |||||||||||||||||||||| |||||||||||||||||||||   
gcacgg aa aaa uc gg gu acagcggaccggcaacauucuc aacuacugguaaugaucuuuu  a
      c  c   u  a  c  u                      g                     ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_683786: 2051-2190 [-]

Database links

Mature pab-miR3695c

Accession MIMAT0044815
Description Picea abies pab-miR3695c mature miRNA
Sequence 24 - UGUCGCCUGGUCGUUGUGGGG - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918