miRBase entry: pab-MIR3710e

Stem-loop pab-MIR3710e


Accession
MI0036732
Description
Picea abies pab-MIR3710e precursor miRNA


Sequence

ucugcagacgcucccacacucggUUGGGAAUCUGACGGGCCUCCaacgucuuaacuuguccuggugcuccgcucugcaaacucucccaaacucuguugggaaccugaggggccuccaaagucuugacuuggguggguguuccacucugcaga
((((((((.((.(((((.((.((((((((...((..(((((((((...(((((((......((((((........))).......)))......)))))))...)).))))))).))...)))))))).))))))).)).....))))))))

Structure
        ----c  u     a  c        AUC  AC       -  acg       uugucc   -------   ucc 
ucugcaga     gc cccac cu ggUUGGGA   UG  GGGCCUC Ca   ucuuaac      ugg       ugc   g
||||||||     || ||||| || ||||||||   ||  ||||||| ||   |||||||      |||       |||    
agacgucu     ug gggug gg ucaguucu   ac  uccgggg gu   aggguug      acc       acg   c
        caccu  u     -  u        gaa  -c       a  cca       ucucaa   cucucaa   ucu 


Annotation confidence Not enough data
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Genome context
MA_143311: 11695-11846 [+]

Database links

Mature pab-miR3710e

Accession MIMAT0044830
Description Picea abies pab-miR3710e mature miRNA
Sequence 24 - UUGGGAAUCUGACGGGCCUCC - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918