miRBase entry: pab-MIR4414

Stem-loop pab-MIR4414


Accession
MI0036747
Description
Picea abies pab-MIR4414 precursor miRNA


Sequence

ugaaacUGCUGCCGGCUCAUUCAUUCAccagcucacucucaacacacagacgagacgacuggguugaugcgugaaugauccgggagcugauuuc
.(((((.(((.((((.((((((((.((.((((((((((((..(.....)..)))).)..))))))).)).)))))))).)))).))).).))))

Structure
u    - U   G    C        U  c       -- -    aa a 
 gaaa c GCU CCGG UCAUUCAU CA cagcuca  c ucuc  c c
 |||| | ||| |||| |||||||| || |||||||  | ||||  | a
 cuuu g cga ggcc aguaagug gu guugggu  g agag  g c
-    a u   g    u        c  a       ca c    ca a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_1391: 22051-22144 [+]

Database links

Mature pab-miR4414

Accession MIMAT0044845
Description Picea abies pab-miR4414 mature miRNA
Sequence 7 - UGCUGCCGGCUCAUUCAUUCA - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918