miRBase entry: pab-MIR482o

Stem-loop pab-MIR482o


Accession
MI0036759
Description
Picea abies pab-MIR482o precursor miRNA

Literature search
1 open access papers mention pab-MIR482o
(5 sentences)

Sequence

acagggaugcugugcaguguggggcauuaggccugggacgauuggaaagacuuggucuauuuucuccgcuuagUCUUCCCAACCCCUCCCAUGCCuauauuccccacugcacaucccugu
(((((((...(((((((((.((((...(((((.(((((...((((.((((((.(((...........))).)))))).))))....))))).)))))...))))))))))))))))))))

Structure
       ugc         u    cau     c     -cga    a      u   cuau 
acaggga   ugugcagug gggg   uaggc uggga    uugg aagacu ggu    u
|||||||   ||||||||| ||||   ||||| |||||    |||| |||||| |||    u
ugucccu   acacgucac cccu   auCCG ACCCU    AACC UUCUga ucg    u
       ---         -    uau     U     CCCC    C      u   ccuc 


Annotation confidence Not enough data
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Genome context
MA_120076: 14017-14136 [-]

Database links

Mature pab-miR482o

Accession MIMAT0044857
Description Picea abies pab-miR482o mature miRNA
Sequence 74 - UCUUCCCAACCCCUCCCAUGCC - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918