miRBase entry: pab-MIR11405

Stem-loop pab-MIR11405


Accession
MI0036763
Description
Picea abies pab-MIR11405 precursor miRNA


Sequence

uucUUGACCAAGUUGGAGAUGAUCcgugcagccgcuucucuaaacuccuucucuucagguuccccccaauucagcauauugaucagcaucuccaccacgucuugca
.....(((...((.((((((((((.((((((((........................))))............))))...)))))...)))))))...))).....

Structure
uucUU   CAA  U     ---     --c    ------------    gcuucucuaaa 
     GAC   GU GGAGA   UGAUC   gugc            agcc           c
     |||   || |||||   |||||   ||||            ||||            
     cug   ca ccucu   acuag   uacg            uugg           u
acguu   cac  -     acg     uua    acuuaacccccc    acuucucuucc 


Annotation confidence Not enough data
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Genome context
MA_347677: 3082-3187 [+]

Database links

Mature pab-miR11405

Accession MIMAT0044861
Description Picea abies pab-miR11405 mature miRNA
Sequence 4 - UUGACCAAGUUGGAGAUGAUC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918