miRBase entry: pab-MIR529n

Stem-loop pab-MIR529n


Accession
MI0036778
Description
Picea abies pab-MIR529n precursor miRNA


Sequence

gccucgccagagucugaaccAGAAGAGAGAGAGCACCGCCUcuaaucuuaaaccuccaaugauccaucuuacauauuuggaguggagaagaggaggugcucucucucuucacguucagguguuucaggcgauaugc
((.(((((.((((((((((..((((((((((((((((.(((((..((((....((((((.................))))))..))))))))).))))))))))))))))..)))))))...))).)))))...))

Structure
  --c     a   ---       cA                G     aa    aaac      ugaucca 
gc   ucgcc gag   ucugaac  GAAGAGAGAGAGCACC CCUcu  ucuu    cuccaa       u
||   ||||| |||   |||||||  |||||||||||||||| |||||  ||||    ||||||       c
cg   agcgg cuu   ggacuug  cuucucucucucgugg ggaga  agag    gagguu       u
  uau     a   ugu       ca                a     --    --gu      uauacau 


Annotation confidence Not enough data
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Genome context
MA_799732: 3175-3310 [-]

Database links

Mature pab-miR529n

Accession MIMAT0044876
Description Picea abies pab-miR529n mature miRNA
Sequence 21 - AGAAGAGAGAGAGCACCGCCU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918