miRBase entry: pab-MIR529o

Stem-loop pab-MIR529o


Accession
MI0036779
Description
Picea abies pab-MIR529o precursor miRNA


Sequence

gccucgucagagucugaaccAGAAGAGAGAGAGCACCGCCUgucaucuuaagccugcaaugauccaugucacauauuuggacuggagaagaggaggugcucucucuuuucacguuuaggcgcauccggcgauaugc
((.(((((.((((((((((..((((((((((((((((.(((.(..((((.((((.....((((....)))).......)).)).))))).))).))))))))))))))))..))))))))...)).)))))...))

Structure
  --c     a  ---        cA                G   g ca    a  -  --ugcaa    c 
gc   ucguc ga   gucugaac  GAAGAGAGAGAGCACC CCU u  ucuu ag cc       ugau c
||   ||||| ||   ||||||||  |||||||||||||||| ||| |  |||| || ||       ||||  
cg   agcgg cu   cggauuug  cuuuucucucucgugg gga a  agag uc gg       acug a
  uau     c  acg        ca                a   g --    g  a  uuuauac    u 


Annotation confidence Not enough data
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Genome context
MA_804: 2519-2654 [-]

Database links

Mature pab-miR529o

Accession MIMAT0044877
Description Picea abies pab-miR529o mature miRNA
Sequence 21 - AGAAGAGAGAGAGCACCGCCU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918