miRBase entry: pab-MIR536a

Stem-loop pab-MIR536a


Accession
MI0036785
Description
Picea abies pab-MIR536a precursor miRNA


Sequence

cuuucagagccguaguuuggcacgauucaaugguuguguaauucuuugaauuuguaucucucccuugcaCCGUGCCAAGCUGCGUGCACCugaaag
(((((((.((((((((((((((((...(((.((..(((.(((((...)))))..)))....)).)))...)))))))))))))).))..)))))))

Structure
       -a  -              auu   u  --uu   -u     u 
cuuucag  gc cguaguuuggcacg   caa gg    gug  aauuc  
|||||||  || ||||||||||||||   ||| ||    |||  ||||| u
gaaaguC  CG GCGUCGAACCGUGC   guu cc    uau  uuaag  
       CA  U              Cac   c  ucuc   gu     u 


Annotation confidence Not enough data
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Genome context
MA_22068: 17390-17485 [+]

Database links

Mature pab-miR536a

Accession MIMAT0044883
Description Picea abies pab-miR536a mature miRNA
Sequence 70 - CCGUGCCAAGCUGCGUGCACC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918