Stem-loop pab-MIR11414

Accession

MI0036818

Description

Picea abies pab-MIR11414 precursor miRNA

Sequence

aucaaaggauggugacauggauugAAUUUCAUCAAUCUUGUCGGAuacaauucauuuccaguuguugguuggaaauuuuauuuuggaguucggaaaugauuuguauccgacaagguugaugaaaaucaagucacaucacgacccuuugau
((((((((.(.((((..(((.((((.((((((((((((((((((((((((.((((((((.......(.((.(((((...))))).)).)..)))))))).)))))))))))))))))))))))).)))).)))..)))).).))))))))

Structure

        a g    ca   a    A                        u        aguuguu g  g     u 
aucaaagg u guga  ugg uugA UUUCAUCAAUCUUGUCGGAuacaa ucauuucc       g uu gaaau  
|||||||| | ||||  ||| |||| |||||||||||||||||||||||| ||||||||       | || ||||| u
uaguuucc a cacu  acu aacu aaaguaguuggaacagccuauguu aguaaagg       u ag uuuua  
        c g    ac   g    a                        u        -----cu g  g     u 

Annotation confidence Not enough data

Genome context

MA_10436877: 31462-31611 [-]

Mature pab-miR11414

• Accession: MIMAT0044916
• Description: Picea abies pab-miR11414 mature miRNA
• Sequence: 25 - AAUUUCAUCAAUCUUGUCGGA - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918