miRBase entry: pab-MIR11427a

Stem-loop pab-MIR11427a


Accession
MI0036839
Description
Picea abies pab-MIR11427a precursor miRNA


Sequence

ugauauucuugauccuccauuuucgcuuucgguuucauagacuuuuaccuggcccgcaguguucgcuaauaauuuagcgaacacugcacgcuauauagaaguagaugAGACCGAAGGCGAGAAUGGAGCaucaagaauauca
(((((((((((((.((((((((((((((((((((((((..(((((((..((((..((((((((((((((....))))))))))))))..))))..)))))))..)))))))))))))))))))))))).)))))))))))))

Structure
             c                        ag       cc    cc              u 
ugauauucuugau cuccauuuucgcuuucgguuucau  acuuuua  uggc  gcaguguucgcuaa a
||||||||||||| ||||||||||||||||||||||||  |||||||  ||||  ||||||||||||||  
acuauaagaacua GAGGUAAGAGCGGAAGCCAGAgua  ugaagau  aucg  cgucacaagcgauu a
             C                        ga       au    ca              u 


Annotation confidence Not enough data
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Genome context
MA_6429974: 233-374 [-]

Database links

Mature pab-miR11427a

Accession MIMAT0044937
Description Picea abies pab-miR11427a mature miRNA
Sequence 108 - AGACCGAAGGCGAGAAUGGAGC - 129
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918