Stem-loop pab-MIR11428

Accession

MI0036841

Description

Picea abies pab-MIR11428 precursor miRNA

Sequence

auugaaaauacuggagucuuggacAGAUUGAGAACCCUGAGAGAGaucaugcugaucaaaaguccuaauggaacuucucuaauuggauuagagccuaacaugagacucacaaguuuucagcaucugaacucgauggguauauggucaau
(((((..(((((...(((..(..((((((((((((..((.(((...(((((........((((((....)).))))(((((((...))))))).....)))))..))).)).)))))))..)))))..)..))).)))))....)))))

Structure

     --aa     gga   uu ga     --       CC  A   AGa     cugaucaaaaguccuaauggaacuu       u 
auuga    auacu   guc  g  cAGAU  UGAGAAC  UG GAG   ucaug                         cucuaau  
|||||    |||||   |||  |  |||||  |||||||  || |||   |||||                         ||||||| g
uaacu    uaugg   uag  c  gucua  acuuuug  ac cuc   aguac                         gagauua  
     ggua     --g   cu aa     cg       -a  a   -ag     --------------------aaucc       g 

Annotation confidence Not enough data

Genome context

MA_9412504: 117-265 [-]

Mature pab-miR11428

• Accession: MIMAT0044939
• Description: Picea abies pab-miR11428 mature miRNA
• Sequence: 25 - AGAUUGAGAACCCUGAGAGAG - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918