miRBase entry: pab-MIR11429a

Stem-loop pab-MIR11429a


Accession
MI0036842
Description
Picea abies pab-MIR11429a precursor miRNA


Sequence

cauggauggaaacaagAGCAGCAUGACACCAAGGGCaacuguuaagauggugcugcaaugaagaacuguuguugcccuuggugucaugcagcucccuguuucuauucaug
((((((((((((((.((((.(((((((((((((((((((......((((((.((.......)).))))))))))))))))))))))))).))))..))))))))))))))

Structure
              -a    A                   uguuaa      g  gc 
cauggauggaaaca  gAGC GCAUGACACCAAGGGCaac      gauggu cu  a
||||||||||||||  |||| |||||||||||||||||||      |||||| ||  a
guacuuaucuuugu  cucg cguacugugguucccguug      uuguca ga  u
              cc    a                   ------      a  ag 


Annotation confidence Not enough data
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Genome context
MA_521826: 1779-1888 [-]

Database links

Mature pab-miR11429a

Accession MIMAT0044940
Description Picea abies pab-miR11429a mature miRNA
Sequence 17 - AGCAGCAUGACACCAAGGGC - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918