miRBase entry: pab-MIR11429b

Stem-loop pab-MIR11429b


Accession
MI0036843
Description
Picea abies pab-MIR11429b precursor miRNA


Sequence

cauaauagaaacaaggAGCAGCAUGACACCAAGGGCaacuguuaagauggugcugcccuuggugucaugcagcuccuuguuucuacucaug
.....((((((((((((((.((((((((((((((((((((((....)))))..))))))))))))))))).))))))))))))))......

Structure
-cauaa              A                 --     u 
      uagaaacaaggAGC GCAUGACACCAAGGGCa  acugu a
      |||||||||||||| |||||||||||||||||  |||||  
      aucuuuguuccucg cguacugugguucccgu  uggua a
guacuc              a                 cg     g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_6904059: 735-825 [-]

Database links

Mature pab-miR11429b

Accession MIMAT0044941
Description Picea abies pab-miR11429b mature miRNA
Sequence 17 - AGCAGCAUGACACCAAGGGC - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918