Stem-loop pab-MIR11409b

Accession

MI0036854

Description

Picea abies pab-MIR11409b precursor miRNA

Sequence

uccaucuuaacuccggaucuaucaagugucgagagggaucaaaucucuagaggugcaaaccuuuaaccuuuccucaagcuagaggugcaaaccuuuaaccuuuccucaaguuuugcacucuaaaaagguugguaccucuagAUAUUUGAUCCCUCUUGGCGCuugauagauccgaauuuaagaugga
((((((((((...(((((((((((((((((((((((((((((((.(((((((((((.(((((((........(((......)))(((((((.(((............))).))))))).....))))))).))))))))))).)))))))))))))))))))))))))))))))...))))))))))

Structure

          cuc                               c           a       aaccuuuccucaagcuagag       c   uaacc 
uccaucuuaa   cggaucuaucaagugucgagagggaucaaau ucuagaggugc aaccuuu                    gugcaaa cuu     u
||||||||||   ||||||||||||||||||||||||||||||| ||||||||||| |||||||                    ||||||| |||      
agguagaauu   gccuagauaguuCGCGGUUCUCCCUAGUUUA Agaucuccaug uuggaaa                    cacguuu gaa     u
          uaa                               U           g       ---------------aaucu       u   cuccu 

Annotation confidence Not enough data

Genome context

MA_8534: 23569-23755 [-]

Mature pab-miR11409b

• Accession: MIMAT0044952
• Description: Picea abies pab-miR11409b mature miRNA
• Sequence: 142 - AUAUUUGAUCCCUCUUGGCGC - 162
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918