Stem-loop pab-MIR11441b

Accession

MI0036867

Description

Picea abies pab-MIR11441b precursor miRNA

Sequence

agaAUUGCCGCGUCGUCUUUGGCGuuggaaagagaacgacauuguuuuaauuuuucaauaauguuacaagauugaauggguaaucauuaccauguuuacaggaaauagcccugcgaggaauuagauugguucgaagugaguacaaugauauugaugacgaugaugcauuggg
.....((((((((((((..((.(((((.........(((.((((.(((((((((((................(((((.(((((...)))))..)))))((((.......)))).))))))))))).))))))).........))))).))..))))))).))..))).....

Structure

agaAU   --  -       UU  G     gaaagagaa   c    u           aauaauguuacaagau     -g     u 
     UGC  CG CGUCGUC  UG CGuug         cga auug uuuaauuuuuc                ugaau  gguaa  
     |||  || |||||||  || |||||         ||| |||| |||||||||||                |||||  ||||| c
     acg  gu gcaguag  au guaac         gcu uggu agauuaaggag                auuug  ccauu  
ggguu   ua  a       uu  a     augagugaa   -    u           cgucccgauaaaggac     ua     a 

Annotation confidence Not enough data

Genome context

MA_136716: 21090-21261 [-]

Mature pab-miR11441b

• Accession: MIMAT0044965
• Description: Picea abies pab-miR11441b mature miRNA
• Sequence: 4 - AUUGCCGCGUCGUCUUUGGCG - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918