miRBase entry: pab-MIR11454b

Stem-loop pab-MIR11454b


Accession
MI0036883
Description
Picea abies pab-MIR11454b precursor miRNA


Sequence

ugauggcguaggaaucgcccaguucgugaaaucucuaagugaggcguucuugccauggauguggcaagcuacaacgaagccuuuccuCAGAGCUUUCACGAAUUGGGCaauuccuauagucgucg
.((((((((((((((.(((((((((((((((.((((.((.((((((((((((((((....))))))))....)))...)))))..)).)))).))))))))))))))).)))))))).)))))).

Structure
u      -        c               u    a  -u     ---   ----        g 
 gauggc guaggaau gcccaguucgugaaa cucu ag  gaggc   guu    cuugccau g
 |||||| |||||||| ||||||||||||||| |||| ||  |||||   |||    ||||||||  
 cugcug uauccuua CGGGUUAAGCACUUU GAGA uc  uuccg   caa    gaacggug a
g      a        a               C    C  cu     aag   cauc        u 


Annotation confidence Not enough data
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Genome context
MA_8661819: 2271-2395 [-]

Database links

Mature pab-miR11454b

Accession MIMAT0044981
Description Picea abies pab-miR11454b mature miRNA
Sequence 88 - CAGAGCUUUCACGAAUUGGGC - 108
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918