miRBase entry: pab-MIR11423b

Stem-loop pab-MIR11423b


Accession
MI0036892
Description
Picea abies pab-MIR11423b precursor miRNA


Sequence

acugguacggaCGAGAAACGUCGCCGGUCGUAuuguacgacguuuccaaaucgagaaacgccguacgguacgaccgacgauguuucucggccauacuguaccugu
((.(((((((.((((((((((((.(((((((((((((((.((((((........)))))).))))))))))))))).)))))))))))).)).....))))).))

Structure
  u     -----  a            C               a      caa 
ac gguac     gg CGAGAAACGUCG CGGUCGUAuuguacg cguuuc   a
|| |||||     || |||||||||||| ||||||||||||||| ||||||    
ug ccaug     cc gcucuuuguagc gccagcauggcaugc gcaaag   u
  u     ucaua  g            a               c      agc 


Annotation confidence Not enough data
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Genome context
MA_8303833: 2389-2493 [-]

Database links

Mature pab-miR11423b

Accession MIMAT0044990
Description Picea abies pab-miR11423b mature miRNA
Sequence 12 - CGAGAAACGUCGCCGGUCGUA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918