Stem-loop pab-MIR11462

Accession

MI0036897

Description

Picea abies pab-MIR11462 precursor miRNA

Sequence

cuucucguggccgggccgagcagcuUCUGCCAGAGUGUGGCCGCGGAuuuugcgucugugguuguagugguggcaccauacugguacaaagugaacugcgcgguuacucucucucagaagcugcuccgccauggcaagaucag
....((...(((((((.((((((((((((..((((.(((((((((.(.(((((...((((.(.(((.((((...))))))).).))))..))))).).))))))))).))))..)))))))))))).))).))))..))....

Structure

cuuc  gug    -   c            CC    U         G u     guc    g u   g    g 
    uc   gccg ggc gagcagcuUCUG  AGAG GUGGCCGCG A uuugc   ugug u gua uggu  
    ||   |||| ||| ||||||||||||  |||| ||||||||| | |||||   |||| | ||| |||| g
    ag   cggu ccg cucgucgaagac  ucuc cauuggcgc u aagug   acau g cau acca  
gacu  -aa    a   c            uc    u         g c     -aa    g u   -    c 

Annotation confidence Not enough data

Genome context

MA_721368: 6889-7031 [-]

Mature pab-miR11462

• Accession: MIMAT0044995
• Description: Picea abies pab-miR11462 mature miRNA
• Sequence: 26 - UCUGCCAGAGUGUGGCCGCGGA - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918