Stem-loop pab-MIR11465

Accession

MI0036908

Description

Picea abies pab-MIR11465 precursor miRNA

Sequence

aagaaagccaauauuuaaacaaagaCUAUGGGUUAAGGAUGAGACUguuauguugacccacuguuuaccuuguuuuuuacgaggggauaacugaucuccaacuuucacuugguuugaaaccuuugucucuguucaaauuguuuacauuuuucaaucgcaggucauuauaacggucucauacuuaacuuguagccuuuguuuaaagauuggcuugcuu
(((.((((((((.(((((((((((.((((((((((((..(((((((((((((.(((((...(((...((((((.....))))))((((.....))))((((.......))))..((((((.((((........))))..)))).))..........)))))))).)))))))))))))..)))))))))))).))))))))))).)))))))).)))

Structure

   a        a           a            GA             u     cac   uuaccuuguuuuuuacgaggggauaacugaucuccaacuuucacuugguu  -    -c    ucu 
aag aagccaau uuuaaacaaag CUAUGGGUUAAG  UGAGACUguuaug ugacc   ugu                                                  ug aaac  uuug   c
||| |||||||| ||||||||||| ||||||||||||  ||||||||||||| |||||   |||                                                  || ||||  ||||    
uuc uucgguua aaauuuguuuc gauguucaauuc  acucuggcaauau acugg   acg                                                  ac uuug  aaac   u
   g        g           c            au             u     ---   ----------------------------------------cuaacuuuuu  a    uu    uug 

Annotation confidence Not enough data

Genome context

MA_10426569: 1014-1230 [-]

Mature pab-miR11465

• Accession: MIMAT0045006
• Description: Picea abies pab-miR11465 mature miRNA
• Sequence: 26 - CUAUGGGUUAAGGAUGAGACU - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918