miRBase entry: pab-MIR11467a

Stem-loop pab-MIR11467a


Accession
MI0036910
Description
Picea abies pab-MIR11467a precursor miRNA


Sequence

gugcuucaucccuccgauaagcuuuucagcgcguucacaguagaguuuauauuguagcucuucucaguccguucaggguagaguuuaugauguagauauguacagugacagCUGAAAAGCUUAUCGAAGGGAuugagcau
((((((.((((((.((((((((((((((((..((.(((.(((.((((((((((((((((((.(((.(......).))).)))).))))))))))))).).))).))))).)))))))))))))))).)))))).))))))

Structure
      c      c                gc  u   a   g -             -    u   a uc 
gugcuu aucccu cgauaagcuuuucagc  gu cac gua a guuuauauuguag cucu cuc g  c
|||||| |||||| ||||||||||||||||  || ||| ||| | ||||||||||||| |||| ||| |   
uacgag uAGGGA GCUAUUCGAAAAGUCg  ca gug cau u uagauguaguauu gaga ggg c  g
      u      A                -a  -   a   g a             u    u   a uu 


Annotation confidence Not enough data
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Genome context
MA_35889: 18663-18802 [-]

Database links

Mature pab-miR11467a

Accession MIMAT0045008
Description Picea abies pab-miR11467a mature miRNA
Sequence 112 - CUGAAAAGCUUAUCGAAGGGA - 132
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918