miRBase entry: pab-MIR11467b

Stem-loop pab-MIR11467b


Accession
MI0036911
Description
Picea abies pab-MIR11467b precursor miRNA


Sequence

gugcuucaucccuccgauaagcuuuucagcguguucacaguagaguuuauauuguagcucuuuucaguccguucaggguagaguuuaugauauagcuauguacagugacagCUGAAAAGCUUAUCGAAGGGAucgagcac
((((((.((((((.((((((((((((((((.(((.(((.(((.(..(((((((((((((((.(((.(......).))).)))).)))))))))))...).))).)))))))))))))))))))))).)))))).))))))

Structure
      c      c                g   u   a   g -gu           -    u   a uc 
gugcuu aucccu cgauaagcuuuucagc ugu cac gua a   uuauauuguag cucu uuc g  c
|||||| |||||| |||||||||||||||| ||| ||| ||| |   ||||||||||| |||| ||| |   
cacgag uAGGGA GCUAUUCGAAAAGUCg aca gug cau u   gauauaguauu gaga ggg c  g
      c      A                -   -   a   g auc           u    u   a uu 


Annotation confidence Not enough data
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Genome context
MA_77911: 4276-4415 [-]

Database links

Mature pab-miR11467b

Accession MIMAT0045009
Description Picea abies pab-miR11467b mature miRNA
Sequence 112 - CUGAAAAGCUUAUCGAAGGGA - 132
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918