miRBase entry: pab-MIR11470

Stem-loop pab-MIR11470


Accession
MI0036914
Description
Picea abies pab-MIR11470 precursor miRNA


Sequence

ugucagaccugucggaguaaggacaCUUGGGAUUGAAGAUUGAUCUugaguuaaccuaauuaggaguaggcuaacuugggagcaaucuucccuccugaguguccuuacucuagcaggucuggca
((((((((((((.(((((((((((((((((((..((((((((.((((((((((.((((........)))).)))))))))).))))))))..))))))))))))))))))).))))))))))))

Structure
            c                   UU        A          a    auu 
ugucagaccugu ggaguaaggacaCUUGGGA  GAAGAUUG UCUugaguua ccua   a
|||||||||||| |||||||||||||||||||  |||||||| |||||||||| ||||    
acggucuggacg ucucauuccugugaguccu  cuucuaac aggguucaau ggau   g
            a                   cc        g          c    gag 


Annotation confidence Not enough data
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Genome context
MA_6213100: 117-240 [+]

Database links

Mature pab-miR11470

Accession MIMAT0045012
Description Picea abies pab-miR11470 mature miRNA
Sequence 26 - CUUGGGAUUGAAGAUUGAUCU - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918