miRBase entry: pab-MIR11476a

Stem-loop pab-MIR11476a


Accession
MI0036920
Description
Picea abies pab-MIR11476a precursor miRNA


Sequence

auuucGAUUGCAGUAGGGUUGUUUAGCagugaacaaacaacccauuuaauggacgggccugaucgcugcccauauugacauguccauucuauuuguuguguuuuacucuuaagcagcccuucuccgauccaccu
.....(((((.((.((((((((((((.((((((...(((((..((..(((((((((((.........))))..........)))))))..))..)))))..)))))).)))))))))))).)).))))).....

Structure
auuuc     C  U            C      caa     cc  uu       ----------    cug 
     GAUUG AG AGGGUUGUUUAG agugaa   acaac  au  aauggac          gggc   a
     ||||| || |||||||||||| ||||||   |||||  ||  |||||||          ||||   u
     cuagc uc ucccgacgaauu ucauuu   uguug  ua  uuaccug          cccg   c
uccac     c  u            c      -ug     uu  uc       uacaguuaua    ucg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_10433104: 2424-2557 [+]

Database links

Mature pab-miR11476a

Accession MIMAT0045018
Description Picea abies pab-miR11476a mature miRNA
Sequence 6 - GAUUGCAGUAGGGUUGUUUAGC - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918