miRBase entry: pab-MIR11479

Stem-loop pab-MIR11479


Accession
MI0036924
Description
Picea abies pab-MIR11479 precursor miRNA


Sequence

gucggugGGACAUGAUGCUGAUGAUGAUuugcucagcgaaauauauuuguaugaaucccccgac
(((((.((((..(.((((.((((.((.(((((...))))).)))))).)))).).)))))))))

Structure
     u    CA G    U    A  A     u 
gucgg gGGA  U AUGC GAUG UG Uuugc  
||||| ||||  | |||| |||| || ||||| c
cagcc cccu  a uaug uuau au aagcg  
     -    -a g    u    -  a     a 


Annotation confidence Not enough data
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Genome context
MA_916556: 2617-2680 [-]

Database links

Mature pab-miR11479

Accession MIMAT0045022
Description Picea abies pab-miR11479 mature miRNA
Sequence 8 - GGACAUGAUGCUGAUGAUGAU - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918