Stem-loop pab-MIR3627h

Accession

MI0036930

Description

Picea abies pab-MIR3627h precursor miRNA

Sequence

agaggaagcgguguuguguuucUGGCGCGGAUGAGUUGACACUGcuuucauauauccacuucauucauucaguuugagaugaagaaggaauauuugcaggcagugucaucucucugcgccuggaaccucccguuccugu
..(((((.(((.(..(.(((((.((((((((.(((.(((((((((((.((.((((((.(((((((((.......))).))))))..)).)))).)).))))))))))).))))))))))).)))))).)))))))))..

Structure

ag     g   u uu u     U        U   U           u  u    -  -a      -   uu 
  aggaa cgg g  g guuuc GGCGCGGA GAG UGACACUGcuu ca auau cc  cuucau uca  c
  ||||| ||| |  | ||||| |||||||| ||| ||||||||||| || |||| ||  |||||| |||  a
  uccuu gcc c  c caagg ccgcgucu cuc acugugacgga gu uaua gg  gaagua agu  g
ug     -   - -u -     u        -   u           c  u    a  aa      g   uu 

Annotation confidence Not enough data

Genome context

MA_72815: 22442-22580 [-]

Mature pab-miR3627h

• Accession: MIMAT0045028
• Description: Picea abies pab-miR3627h mature miRNA
• Sequence: 23 - UGGCGCGGAUGAGUUGACACUG - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918