miRBase entry: pab-MIR3693h

Stem-loop pab-MIR3693h

Accession

MI0036938

Description

Picea abies pab-MIR3693h precursor miRNA

Sequence

aacgcccuucaugaagguggucaUAAUUGCUCAUAGAUGGGAGUuuccucacauuugggccuuugauauucaacaaacagaucugcucaaguguuugaauaaggacuaugaugagcagccccccaucuaugaacaguucaugagcaccuacggcguu
((((((......(.(((((.(((((((((.(((((((((((....(((........)))...((((...)))).........((((((((((.(((....))).)))....)))))))...))))))))))).))))).)))).))))).)))))))

Structure

      cuucau a     g    -     C           AGUuuccucacauuugggccuuugauauucaacaaacagau       ----   g   g 
aacgcc      g aggug ucaU AAUUG UCAUAGAUGGG                                         cugcuca    agu uuu a
||||||      | ||||| |||| ||||| |||||||||||                                         |||||||    ||| |||  
uugcgg      c uccac agua uugac aguaucuaccc                                         gacgagu    uca gaa a
      ------ a     g    c     a           --------------------------------------ccc       agua   g   u

Annotation confidence Not enough data

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Genome context

MA_114820: 28729-28885 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pab-MIR3693h

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pab-miR3693h

Accession	MIMAT0045036
Description	Picea abies pab-miR3693h mature miRNA
Sequence	24 - UAAUUGCUCAUAGAUGGGAGU - 44
Evidence	experimental Illumina [1]

References

PubMed ID: 26318183
Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
"Xia R, Xu J, Arikit S, Meyers BC"
"Mol Biol Evol (2015) 32:2905-2918